Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015852473.1_cds_XP_016511864.1_24563
CDS Infomation

[gene=LOC107828977] [db_xref=GeneID:107828977] [protein=LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1] [protein_id=XP_016511864.1] [location=join(18952..19669,19766..19795,20127..20384,20674..21641)] [gbkey=CDS]
Sequence

ATGGATTTATTTTCTTGGTTTTTTATTTCCATTTTGTTTCATTTTTGGTGCTTTAATTCA
GCTCTAGGACAGAACACATCCTCCTCAAGTTGTACTAAAGAATTCCAATGTGGAAACTTA
GGAAATTTGAGCTTTCCTTTCTACAAATCCACACAAATTGATTGTGGTTTGTGTAAAGTG
GATTGTGAAGCAACTCCAAATCCCATAATTGAATTGGATGGAGTGAAATATCAAGCACTT
GAGAAATCTGAAGTTTTCATCAAAATTAAGGACACTATTCTTGGAAATCTTTTGGAAAAC
AAGAGTTGCCAATCTTTTGATAGAAATCTGTCTTTAACAATCTCTCCTTCAATCACATAT
AGATTCAGCCCCTATCTCACTTTGTTCAAATGCAATAATAGCCAAAAGAGACATGAAGAA
GTTTTCATTTCCACAAGATATCACAGCTACAATAGCTGTGAAAGTTTCATATTATACTAT
AACCTCTCAATGGATTACTATCCAGGATTTCCTCTTCCTAGTAGCTGTTCCTTTATTCGG
CTGCCCGTGCCACCGAATTCAGAATCAAAATCAGAAAAAAATGGCCTATTTGGTATGTTA
ACTGATGAAGTTGTACTAGGATGGACTGTGTCTGATGAGTGTAATCGGTGTTACTATAGA
GGAGGCAGATGTCAAACTGATGAAACTACTAACAAATTTCATTGTTATAATACCAAAGGA
AATAAAAAAGTGAAAGTGATTGTTGCAGTTTCAGCATTTATCGGTTTACTTTTTGGACTC
TGCACAATTGCCTGTGTTATATGGTTTTGCAAGAGGAGGAAAAATGATTCTTCACCATTT
CTTTCAAGAAATACATCTGGTGTTTCAATGATTCATCAAGAGATCGAGGAACGTAGCCAA
TATCTTGGAATCCCGGTATTCTCCTACAGAGAACTTGAAGAAGCCACCAACAAATTCAAC
TCTTCTAAACAACTTGGTGATGGAGGTTATGGAACTGTGTACTATGGGAAACTTAGAGAT
GGAAAAGAAGTTGCAGTTAAGCGCCTTTATGAGCACAACCACAACCAAATGAAACAGTTC
ATCAATGAAATTGAAATTCTTACTCGCCTTAGGCATCCGAATCTTGTTATCCTTTATGGA
TGCACATCAAGACGTAGTCGTGAACTCTTCCTTGTTTATGAGTACATTCCCAATGGAACA
ATTGCTGATCACCTGCACGGTCATAGAGCAAAGGATAAGTTACTTACATGGCCTATACGG
CTCAAAATCGCTATAGAAATTGCCAGTGCATTGGCTTACCTTCATGCTTCTGACATCATA
CACCGCGATGTCAAGACTAATAACATTCTCCTGGACAATGACTTTTGTGTCAAAGTAGCA
GATTTCGGGCTGTCAAAACTCTTCCCTAATGATGTTACTCATATCTCAACTGCACCTCAG
GGGACCCCGGGATATGTTGATCCTCAATATCATGAATGTTACCAGCTTACTGATAAGAGT
GATGTTTATAGCTTCGGGGTTGTCCTCGTCGAACTCATATCATCAATGCCTGCAGTGGAT
ATGAATAGACATATGCACGAGATTAACTTGGCTAACTTCGCGATGAACAGGATACTAAAA
TGTGCGTTTGAGGAAGTGATCGATCCATCTCTTGGATTCGAGACAAATGCTGAAATTAGG
AGGATGACTATATCAGTTGCAGAACTAGCTTTTCAGTGCCTGCAAGGTGTGAAGGACATG
AGGCCTAAAATGGAAGAAGTACTCGAGACGTTGAAGACTATTAAGGAAGGTGAATGGAAA
AATTACCACAGAAAGGAGACCAGTGGTAAATGTACTGAGCTTAGAAGGGTAAAACCGCGC
CTTCCTTCTGAAACGGAGGATGCTGTGTTATTGAAGAAAAATATTCCAGCTTCACCTGAT
ACTGTGATTGATACATGGGCTAGTAGCTCCACTACAAATAGTACTGGAGGTTGA

Peptide Sequence

PEP ID

XP_016511864.1
PEP Infomation

PREDICTED: LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1 [Nicotiana tabacum]
Sequence

MDLFSWFFISILFHFWCFNSALGQNTSSSSCTKEFQCGNLGNLSFPFYKSTQIDCGLCKV
DCEATPNPIIELDGVKYQALEKSEVFIKIKDTILGNLLENKSCQSFDRNLSLTISPSITY
RFSPYLTLFKCNNSQKRHEEVFISTRYHSYNSCESFILYYNLSMDYYPGFPLPSSCSFIR
LPVPPNSESKSEKNGLFGMLTDEVVLGWTVSDECNRCYYRGGRCQTDETTNKFHCYNTKG
NKKVKVIVAVSAFIGLLFGLCTIACVIWFCKRRKNDSSPFLSRNTSGVSMIHQEIEERSQ
YLGIPVFSYRELEEATNKFNSSKQLGDGGYGTVYYGKLRDGKEVAVKRLYEHNHNQMKQF
INEIEILTRLRHPNLVILYGCTSRRSRELFLVYEYIPNGTIADHLHGHRAKDKLLTWPIR
LKIAIEIASALAYLHASDIIHRDVKTNNILLDNDFCVKVADFGLSKLFPNDVTHISTAPQ
GTPGYVDPQYHECYQLTDKSDVYSFGVVLVELISSMPAVDMNRHMHEINLANFAMNRILK
CAFEEVIDPSLGFETNAEIRRMTISVAELAFQCLQGVKDMRPKMEEVLETLKTIKEGEWK
NYHRKETSGKCTELRRVKPRLPSETEDAVLLKKNIPASPDTVIDTWASSSTTNSTGG

Transcript Sequence

Gene sequence data has not been registered.